Package: libdr 1.0.0

libdr: Support Functions used by the LIBDR LCMM Analysis

This package provides support functions frequently used by Constantine et al. for their paper, "Large-scale clustering of longitudinal faecal calprotectin and C-reactive protein profiles in inflammatory bowel disease". These functions are primarily used to manipulate data and visualise findings.

Authors:Nathan Constantine-Cooke [aut, cre], Catalina Vallejos [aut]

libdr_1.0.0.tar.gz
libdr_1.0.0.zip(r-4.5)libdr_1.0.0.zip(r-4.4)libdr_1.0.0.zip(r-4.3)
libdr_1.0.0.tgz(r-4.4-any)libdr_1.0.0.tgz(r-4.3-any)
libdr_1.0.0.tar.gz(r-4.5-noble)libdr_1.0.0.tar.gz(r-4.4-noble)
libdr_1.0.0.tgz(r-4.4-emscripten)libdr_1.0.0.tgz(r-4.3-emscripten)
libdr.pdf |libdr.html✨
libdr/json (API)

# Install 'libdr' in R:
install.packages('libdr', repos = c('https://nathansam.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/vallejosgroup/lothian-ibdr/issues

On CRAN:

3.13 score 16 scripts 10 exports 74 dependencies

Last updated 7 days agofrom:3deaf2fc40. Checks:OK: 5 NOTE: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKNov 15 2024
R-4.5-winNOTENov 15 2024
R-4.5-linuxNOTENov 15 2024
R-4.4-winOKNov 15 2024
R-4.4-macOKNov 15 2024
R-4.3-winOKNov 15 2024
R-4.3-macOKNov 15 2024

Exports:buildDTcompareClusteringdescribe_catlcmmHeatmapmakeMetricsmlrPlotplotCatrankCumulativereLabelspaghettiPlot

Dependencies:BiocGenericscirclizecliclueclustercodetoolscolorspaceComplexHeatmapcpp11crayondigestdoParalleldplyrevaluatefansifarverforeachgenericsGetoptLongggplot2GlobalOptionsgluegridExtragtablehighrIRangesisobanditeratorsknitrlabelinglatticelcmmlifecyclemagrittrmarqLevAlgMASSMatrixmatrixStatsmgcvmunsellmvtnormnlmennetnumDerivpatchworkpillarpkgconfigplyrpngpracmapurrrR6randtoolboxRColorBrewerRcpprjsonrlangrngWELLS4Vectorsscalesshapestringistringrsurvivaltibbletidyrtidyselectutf8vctrsviridisviridisLitewithrxfunyaml