Package: libdr 1.0.1

libdr: Support Functions used by the LIBDR LCMM Analysis

This package provides support functions frequently used by Constantine et al. for their paper, "Large-scale clustering of longitudinal faecal calprotectin and C-reactive protein profiles in inflammatory bowel disease". These functions are primarily used to manipulate data and visualise findings.

Authors:Nathan Constantine-Cooke [aut, cre], Catalina Vallejos [aut]

libdr_1.0.1.tar.gz
libdr_1.0.1.zip(r-4.7)libdr_1.0.1.zip(r-4.6)libdr_1.0.1.zip(r-4.5)
libdr_1.0.1.tgz(r-4.6-any)libdr_1.0.1.tgz(r-4.5-any)
libdr_1.0.1.tar.gz(r-4.7-any)libdr_1.0.1.tar.gz(r-4.6-any)
libdr_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
libdr/json (API)

# Install 'libdr' in R:
install.packages('libdr', repos = c('https://nathansam.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/vallejosgroup/lothian-ibdr/issues

On CRAN:

Conda:

clusteringcrpdenmarkfcalibdlcmmscotland

2.23 score 17 scripts 10 exports 71 dependencies

Last updated from:e44d6362ea. Checks:7 NOTE, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE140
source / vignettesOK195
linux-release-x86_64NOTE147
macos-release-arm64NOTE102
macos-oldrel-arm64NOTE85
windows-develNOTE92
windows-releaseNOTE90
windows-oldrelNOTE90
wasm-releaseOK140

Exports:buildDTcompareClusteringdescribe_catlcmmHeatmapmakeMetricsmlrPlotplotCatrankCumulativereLabelspaghettiPlot

Dependencies:BiocGenericscirclizecliclueclustercodetoolscolorspaceComplexHeatmapcpp11crayondigestdoParalleldplyrevaluatefarverforcatsforeachgenericsGetoptLongggplot2GlobalOptionsgluegridExtragtablehighrIRangesisobanditeratorsknitrlabelinglatticelcmmlifecyclemagrittrmarqLevAlgMatrixmatrixStatsmvtnormnlmennetnumDerivpatchworkpillarpkgconfigplyrpngpracmapurrrR6RColorBrewerRcpprjsonrlangS4VectorsS7scalesshapespacefillrstringistringrsurvivaltibbletidyrtidyselectutf8vctrsviridisviridisLitewithrxfunyaml